Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.25■□□□□ 0.99
NLGN3Q9NZ94 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 KRT18P11-201ENST00000435214 1283 ntBASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NLGN3Q9NZ94 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NLGN3Q9NZ94 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NLGN3Q9NZ94 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLGN3Q9NZ94 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 DUSP8P3-201ENST00000399571 1760 ntBASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NLGN3Q9NZ94 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 ESRRAP2-201ENST00000418437 1549 ntBASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLGN3Q9NZ94 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 441.2 ms