Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 OR2I1P-207ENST00000453522 948 ntBASIC20.3■□□□□ 0.84
KLHL1Q9NR64 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KLHL1Q9NR64 AC079630.1-202ENST00000618127 1840 ntBASIC20.3■□□□□ 0.84
KLHL1Q9NR64 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 MIR6084-201ENST00000622012 110 ntBASIC20.29■□□□□ 0.84
KLHL1Q9NR64 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KLHL1Q9NR64 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.28■□□□□ 0.84
KLHL1Q9NR64 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 AC233723.2-201ENST00000623798 2106 ntBASIC20.27■□□□□ 0.84
KLHL1Q9NR64 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KLHL1Q9NR64 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL1Q9NR64 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL1Q9NR64 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL1Q9NR64 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
KLHL1Q9NR64 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.27■□□□□ 0.83
KLHL1Q9NR64 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 MIR572-201ENST00000384983 95 ntBASIC20.26■□□□□ 0.83
KLHL1Q9NR64 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KLHL1Q9NR64 C1orf229-201ENST00000623686 2258 ntBASIC20.25■□□□□ 0.83
KLHL1Q9NR64 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 YBX1P1-201ENST00000445822 960 ntBASIC20.25■□□□□ 0.83
KLHL1Q9NR64 AL358852.1-201ENST00000623174 1268 ntBASIC20.25■□□□□ 0.83
KLHL1Q9NR64 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KLHL1Q9NR64 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KLHL1Q9NR64 AC012414.1-201ENST00000556676 535 ntBASIC20.24■□□□□ 0.83
KLHL1Q9NR64 AL031602.1-201ENST00000633169 911 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms