Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.59■□□□□ 0.73
HMG20AQ9NP66 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20AQ9NP66 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20AQ9NP66 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 DUX4L18-201ENST00000553347 1267 ntBASIC19.57■□□□□ 0.72
HMG20AQ9NP66 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HMG20AQ9NP66 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 AC244015.2-201ENST00000616358 1861 ntBASIC19.56■□□□□ 0.72
HMG20AQ9NP66 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 AC139795.1-202ENST00000500444 432 ntBASIC19.56■□□□□ 0.72
HMG20AQ9NP66 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20AQ9NP66 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 AC019171.1-201ENST00000601251 1056 ntBASIC19.55■□□□□ 0.72
HMG20AQ9NP66 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
HMG20AQ9NP66 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20AQ9NP66 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20AQ9NP66 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20AQ9NP66 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20AQ9NP66 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20AQ9NP66 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20AQ9NP66 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms