Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.47□□□□□ -0.09
SND1-IT1Q9HBX3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 AF131216.4-201ENST00000638924 1588 ntBASIC14.46□□□□□ -0.09
SND1-IT1Q9HBX3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SND1-IT1Q9HBX3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SND1-IT1Q9HBX3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 KRT18P60-201ENST00000312876 1297 ntBASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.44□□□□□ -0.1
SND1-IT1Q9HBX3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 RARRES2P2-201ENST00000394842 485 ntBASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 MIR4281-201ENST00000580852 62 ntBASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 THA1P-201ENST00000590384 1145 ntBASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SND1-IT1Q9HBX3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 AC144652.1-201ENST00000609974 1624 ntBASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.42□□□□□ -0.1
SND1-IT1Q9HBX3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms