Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXC2Q99958 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXC2Q99958 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXC2Q99958 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
FOXC2Q99958 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXC2Q99958 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXC2Q99958 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXC2Q99958 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXC2Q99958 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXC2Q99958 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXC2Q99958 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXC2Q99958 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXC2Q99958 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.32■□□□□ 0.52
FOXC2Q99958 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXC2Q99958 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXC2Q99958 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXC2Q99958 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXC2Q99958 GCSHP5-201ENST00000443090 522 ntBASIC18.32■□□□□ 0.52
FOXC2Q99958 AC098590.1-201ENST00000468126 897 ntBASIC18.32■□□□□ 0.52
FOXC2Q99958 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXC2Q99958 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXC2Q99958 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXC2Q99958 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXC2Q99958 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXC2Q99958 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXC2Q99958 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXC2Q99958 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXC2Q99958 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.31■□□□□ 0.52
FOXC2Q99958 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXC2Q99958 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXC2Q99958 SLC7A5P1-201ENST00000568957 537 ntBASIC18.31■□□□□ 0.52
FOXC2Q99958 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXC2Q99958 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXC2Q99958 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXC2Q99958 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXC2Q99958 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 MIPEPP3-201ENST00000412105 444 ntBASIC18.3■□□□□ 0.52
FOXC2Q99958 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXC2Q99958 AC010536.3-201ENST00000620306 533 ntBASIC18.3■□□□□ 0.52
FOXC2Q99958 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXC2Q99958 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXC2Q99958 DUSP8P4-201ENST00000399538 1761 ntBASIC18.3■□□□□ 0.52
FOXC2Q99958 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXC2Q99958 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXC2Q99958 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXC2Q99958 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
FOXC2Q99958 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXC2Q99958 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXC2Q99958 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXC2Q99958 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
FOXC2Q99958 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.29■□□□□ 0.52
FOXC2Q99958 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXC2Q99958 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXC2Q99958 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXC2Q99958 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXC2Q99958 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXC2Q99958 AC004687.1-201ENST00000579003 1625 ntBASIC18.28■□□□□ 0.52
FOXC2Q99958 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXC2Q99958 RPS2P4-201ENST00000476944 856 ntBASIC18.28■□□□□ 0.52
FOXC2Q99958 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
FOXC2Q99958 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXC2Q99958 KRT18P20-201ENST00000548986 1279 ntBASIC18.28■□□□□ 0.52
FOXC2Q99958 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.28■□□□□ 0.52
FOXC2Q99958 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXC2Q99958 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXC2Q99958 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXC2Q99958 MKRN4P-201ENST00000444706 1521 ntBASIC18.28■□□□□ 0.52
FOXC2Q99958 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXC2Q99958 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXC2Q99958 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXC2Q99958 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXC2Q99958 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXC2Q99958 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms