Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF2Q99496 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF2Q99496 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF2Q99496 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF2Q99496 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF2Q99496 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF2Q99496 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF2Q99496 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF2Q99496 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF2Q99496 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF2Q99496 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF2Q99496 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF2Q99496 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF2Q99496 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF2Q99496 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.16■□□□□ 0.34
RNF2Q99496 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF2Q99496 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF2Q99496 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF2Q99496 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF2Q99496 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF2Q99496 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 KRT16P3-201ENST00000439127 1283 ntBASIC17.15■□□□□ 0.34
RNF2Q99496 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF2Q99496 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF2Q99496 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RNF2Q99496 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF2Q99496 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RNF2Q99496 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF2Q99496 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF2Q99496 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF2Q99496 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF2Q99496 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF2Q99496 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF2Q99496 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF2Q99496 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF2Q99496 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF2Q99496 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 AL137060.1-201ENST00000618151 2648 ntBASIC17.13■□□□□ 0.33
RNF2Q99496 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF2Q99496 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF2Q99496 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF2Q99496 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF2Q99496 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF2Q99496 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF2Q99496 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
RNF2Q99496 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.12■□□□□ 0.33
RNF2Q99496 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF2Q99496 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF2Q99496 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF2Q99496 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF2Q99496 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF2Q99496 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF2Q99496 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF2Q99496 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF2Q99496 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF2Q99496 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF2Q99496 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF2Q99496 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF2Q99496 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RNF2Q99496 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF2Q99496 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.11■□□□□ 0.33
RNF2Q99496 MIR6724-1-201ENST00000616420 92 ntBASIC17.11■□□□□ 0.33
RNF2Q99496 MIR6724-2-201ENST00000616483 92 ntBASIC17.11■□□□□ 0.33
RNF2Q99496 MIR6724-4-201ENST00000617390 92 ntBASIC17.11■□□□□ 0.33
RNF2Q99496 MIR6724-3-201ENST00000622482 92 ntBASIC17.11■□□□□ 0.33
RNF2Q99496 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF2Q99496 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms