Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC47A1Q96FL8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 AC239859.2-201ENST00000444165 318 ntBASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC47A1Q96FL8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 MTDHP2-201ENST00000601468 714 ntBASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC47A1Q96FL8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 AC009299.2-201ENST00000482477 511 ntBASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC47A1Q96FL8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC47A1Q96FL8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 AL451085.2-201ENST00000605085 799 ntBASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC47A1Q96FL8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC47A1Q96FL8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC47A1Q96FL8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms