Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 FEM1AP4-201ENST00000443167 1987 ntBASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4Y2Q8TD47 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 AC009299.2-201ENST00000482477 511 ntBASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RPS4Y2Q8TD47 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 AL031602.1-201ENST00000633169 911 ntBASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS4Y2Q8TD47 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 AC092028.1-203ENST00000608262 953 ntBASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y2Q8TD47 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 BX664725.1-201ENST00000438252 379 ntBASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y2Q8TD47 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS4Y2Q8TD47 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RPS4Y2Q8TD47 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms