Protein–RNA interactions for Protein: Q8N8W4

PNPLA1, Patatin-like phospholipase domain-containing protein 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA1Q8N8W4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PNPLA1Q8N8W4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.99■■□□□ 1.11
PNPLA1Q8N8W4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PNPLA1Q8N8W4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PNPLA1Q8N8W4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.97■■□□□ 1.11
PNPLA1Q8N8W4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PNPLA1Q8N8W4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PNPLA1Q8N8W4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PNPLA1Q8N8W4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 HLA-L-209ENST00000420110 1011 ntBASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 AL499627.2-201ENST00000606283 725 ntBASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PNPLA1Q8N8W4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.94■■□□□ 1.1
PNPLA1Q8N8W4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 AC027612.3-201ENST00000413684 1047 ntBASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 AC123595.1-201ENST00000440769 1046 ntBASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 NTF6G-201ENST00000591094 616 ntBASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PNPLA1Q8N8W4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PNPLA1Q8N8W4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PNPLA1Q8N8W4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PNPLA1Q8N8W4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms