Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.98■□□□□ 0.47
ZNF546Q86UE3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 AC026202.3-201ENST00000600805 1127 ntBASIC17.97■□□□□ 0.47
ZNF546Q86UE3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ZNF546Q86UE3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF546Q86UE3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
ZNF546Q86UE3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF546Q86UE3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
ZNF546Q86UE3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF546Q86UE3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.93■□□□□ 0.46
ZNF546Q86UE3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF546Q86UE3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms