Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 ABCB10P4-201ENST00000566803 2184 ntBASIC14.19□□□□□ -0.14
SCXQ7RTU7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 SLC47A1P1-202ENST00000449666 945 ntBASIC14.19□□□□□ -0.14
SCXQ7RTU7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 SLC25A24-204ENST00000569674 2357 ntBASIC14.19□□□□□ -0.14
SCXQ7RTU7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 AL162430.1-201ENST00000480705 870 ntBASIC14.18□□□□□ -0.14
SCXQ7RTU7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCXQ7RTU7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.18□□□□□ -0.14
SCXQ7RTU7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 TSPY26P-201ENST00000476365 1326 ntBASIC14.17□□□□□ -0.14
SCXQ7RTU7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
SCXQ7RTU7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.17□□□□□ -0.14
SCXQ7RTU7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.17□□□□□ -0.14
SCXQ7RTU7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SCXQ7RTU7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.17□□□□□ -0.14
SCXQ7RTU7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCXQ7RTU7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 AC133637.1-201ENST00000624115 1537 ntBASIC14.16□□□□□ -0.14
SCXQ7RTU7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SCXQ7RTU7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCXQ7RTU7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.15□□□□□ -0.14
SCXQ7RTU7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.15□□□□□ -0.14
SCXQ7RTU7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCXQ7RTU7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms