Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 CHML-204ENST00000638121 920 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01554Q52M75 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01554Q52M75 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
LINC01554Q52M75 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01554Q52M75 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01554Q52M75 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 LINC00526-201ENST00000581067 1875 ntBASIC10.82□□□□□ -0.68
LINC01554Q52M75 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LINC01554Q52M75 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01554Q52M75 AL359258.2-201ENST00000564063 1566 ntBASIC10.82□□□□□ -0.68
LINC01554Q52M75 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01554Q52M75 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01554Q52M75 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms