Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BSXQ3C1V8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BSXQ3C1V8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BSXQ3C1V8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BSXQ3C1V8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BSXQ3C1V8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BSXQ3C1V8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
BSXQ3C1V8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BSXQ3C1V8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BSXQ3C1V8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.41■□□□□ 0.38
BSXQ3C1V8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 AC092667.1-201ENST00000434301 2586 ntBASIC17.41■□□□□ 0.38
BSXQ3C1V8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.41■□□□□ 0.38
BSXQ3C1V8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.41■□□□□ 0.38
BSXQ3C1V8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BSXQ3C1V8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BSXQ3C1V8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.4■□□□□ 0.38
BSXQ3C1V8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BSXQ3C1V8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.39■□□□□ 0.38
BSXQ3C1V8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 AC092028.1-203ENST00000608262 953 ntBASIC17.39■□□□□ 0.37
BSXQ3C1V8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 AC009102.2-201ENST00000606772 1639 ntBASIC17.39■□□□□ 0.37
BSXQ3C1V8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BSXQ3C1V8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BSXQ3C1V8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BSXQ3C1V8 CA15P2-201ENST00000611168 834 ntBASIC17.38■□□□□ 0.37
BSXQ3C1V8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.38■□□□□ 0.37
BSXQ3C1V8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BSXQ3C1V8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BSXQ3C1V8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BSXQ3C1V8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BSXQ3C1V8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BSXQ3C1V8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BSXQ3C1V8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms