Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 OXCT2P1-201ENST00000447263 1535 ntBASIC21.01■□□□□ 0.95
SLC6A12P48065 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SLC6A12P48065 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SLC6A12P48065 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC6A12P48065 BX842568.3-201ENST00000418104 571 ntBASIC21.01■□□□□ 0.95
SLC6A12P48065 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC6A12P48065 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC6A12P48065 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC6A12P48065 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC6A12P48065 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC6A12P48065 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC6A12P48065 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
SLC6A12P48065 AC096631.2-201ENST00000436136 790 ntBASIC21■□□□□ 0.95
SLC6A12P48065 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21■□□□□ 0.95
SLC6A12P48065 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21■□□□□ 0.95
SLC6A12P48065 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC6A12P48065 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC6A12P48065 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC6A12P48065 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC6A12P48065 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
SLC6A12P48065 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SLC6A12P48065 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC6A12P48065 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A12P48065 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC6A12P48065 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A12P48065 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC6A12P48065 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC6A12P48065 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC6A12P48065 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC6A12P48065 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC6A12P48065 AC233992.3-201ENST00000607491 485 ntBASIC20.97■□□□□ 0.95
SLC6A12P48065 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SLC6A12P48065 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A12P48065 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A12P48065 FAM99A-202ENST00000538190 1989 ntBASIC20.96■□□□□ 0.95
SLC6A12P48065 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
SLC6A12P48065 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC6A12P48065 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC6A12P48065 AC106739.1-201ENST00000617035 715 ntBASIC20.96■□□□□ 0.95
SLC6A12P48065 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A12P48065 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A12P48065 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A12P48065 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC6A12P48065 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.96■□□□□ 0.95
SLC6A12P48065 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A12P48065 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A12P48065 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLC6A12P48065 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SLC6A12P48065 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A12P48065 AC133561.4-201ENST00000566112 224 ntBASIC20.95■□□□□ 0.94
SLC6A12P48065 AC110285.6-201ENST00000617652 491 ntBASIC20.95■□□□□ 0.94
SLC6A12P48065 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
SLC6A12P48065 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A12P48065 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A12P48065 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC6A12P48065 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A12P48065 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms