Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL3P39023 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.56■□□□□ 0.88
RPL3P39023 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RPL3P39023 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RPL3P39023 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 FBXW4P1-201ENST00000426721 2239 ntBASIC20.56■□□□□ 0.88
RPL3P39023 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 AL356441.2-201ENST00000443009 864 ntBASIC20.56■□□□□ 0.88
RPL3P39023 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.56■□□□□ 0.88
RPL3P39023 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.56■□□□□ 0.88
RPL3P39023 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.56■□□□□ 0.88
RPL3P39023 AL512631.2-201ENST00000604634 923 ntBASIC20.56■□□□□ 0.88
RPL3P39023 AL138724.1-201ENST00000606771 1088 ntBASIC20.56■□□□□ 0.88
RPL3P39023 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.56■□□□□ 0.88
RPL3P39023 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RPL3P39023 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPL3P39023 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL3P39023 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RPL3P39023 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL3P39023 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.55■□□□□ 0.88
RPL3P39023 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL3P39023 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL3P39023 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPL3P39023 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.54■□□□□ 0.88
RPL3P39023 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.54■□□□□ 0.88
RPL3P39023 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL3P39023 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPL3P39023 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
RPL3P39023 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL3P39023 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
RPL3P39023 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.53■□□□□ 0.88
RPL3P39023 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RPL3P39023 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.53■□□□□ 0.88
RPL3P39023 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.53■□□□□ 0.88
RPL3P39023 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPL3P39023 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL3P39023 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.53■□□□□ 0.88
RPL3P39023 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.53■□□□□ 0.88
RPL3P39023 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL3P39023 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RPL3P39023 OR7E47P-201ENST00000546390 1422 ntBASIC20.53■□□□□ 0.88
RPL3P39023 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPL3P39023 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPL3P39023 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPL3P39023 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPL3P39023 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPL3P39023 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RPL3P39023 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
RPL3P39023 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPL3P39023 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPL3P39023 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
RPL3P39023 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPL3P39023 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPL3P39023 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RPL3P39023 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.51■□□□□ 0.87
RPL3P39023 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPL3P39023 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.51■□□□□ 0.87
RPL3P39023 FAM99A-202ENST00000538190 1989 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms