Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CLCN1P35523 LINC01006-201ENST00000333319 2292 ntBASIC24.58■■□□□ 1.52
CLCN1P35523 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CLCN1P35523 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CLCN1P35523 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CLCN1P35523 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
CLCN1P35523 AL161729.1-201ENST00000604104 1402 ntBASIC24.57■■□□□ 1.52
CLCN1P35523 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 AL022069.1-201ENST00000568025 1636 ntBASIC24.57■■□□□ 1.52
CLCN1P35523 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN1P35523 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.57■■□□□ 1.52
CLCN1P35523 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.56■■□□□ 1.52
CLCN1P35523 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.56■■□□□ 1.52
CLCN1P35523 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.56■■□□□ 1.52
CLCN1P35523 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.56■■□□□ 1.52
CLCN1P35523 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN1P35523 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCN1P35523 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CLCN1P35523 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CLCN1P35523 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCN1P35523 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CLCN1P35523 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.55■■□□□ 1.52
CLCN1P35523 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.55■■□□□ 1.52
CLCN1P35523 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCN1P35523 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.55■■□□□ 1.52
CLCN1P35523 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCN1P35523 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN1P35523 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
CLCN1P35523 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.54■■□□□ 1.52
CLCN1P35523 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CLCN1P35523 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.54■■□□□ 1.52
CLCN1P35523 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CLCN1P35523 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CLCN1P35523 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
CLCN1P35523 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC24.54■■□□□ 1.52
CLCN1P35523 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.54■■□□□ 1.52
CLCN1P35523 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLCN1P35523 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CLCN1P35523 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLCN1P35523 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 YBX1P4-201ENST00000392794 808 ntBASIC24.53■■□□□ 1.52
CLCN1P35523 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.53■■□□□ 1.52
CLCN1P35523 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.53■■□□□ 1.52
CLCN1P35523 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
CLCN1P35523 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.53■■□□□ 1.52
CLCN1P35523 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.53■■□□□ 1.52
CLCN1P35523 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN1P35523 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.52■■□□□ 1.52
CLCN1P35523 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.52■■□□□ 1.52
CLCN1P35523 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CLCN1P35523 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.52■■□□□ 1.52
CLCN1P35523 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.52■■□□□ 1.52
CLCN1P35523 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN1P35523 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CLCN1P35523 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN1P35523 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.51■■□□□ 1.51
CLCN1P35523 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN1P35523 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN1P35523 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN1P35523 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.51■■□□□ 1.51
CLCN1P35523 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN1P35523 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms