Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 AC133552.2-201ENST00000619106 1032 ntBASIC17.32■□□□□ 0.36
ATP6V0CP27449 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP6V0CP27449 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP6V0CP27449 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0CP27449 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP6V0CP27449 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0CP27449 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0CP27449 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0CP27449 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6V0CP27449 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0CP27449 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
ATP6V0CP27449 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0CP27449 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0CP27449 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP6V0CP27449 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP6V0CP27449 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6V0CP27449 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0CP27449 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0CP27449 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP6V0CP27449 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0CP27449 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP6V0CP27449 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0CP27449 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0CP27449 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0CP27449 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0CP27449 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP6V0CP27449 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ATP6V0CP27449 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6V0CP27449 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.27■□□□□ 0.35
ATP6V0CP27449 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6V0CP27449 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms