Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 Z98882.1-201ENST00000622160 2253 ntBASIC21.72■■□□□ 1.07
KRT4P19013 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT4P19013 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT4P19013 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT4P19013 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT4P19013 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT4P19013 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
KRT4P19013 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
KRT4P19013 AC073130.3-201ENST00000624389 2278 ntBASIC21.72■■□□□ 1.07
KRT4P19013 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT4P19013 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT4P19013 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
KRT4P19013 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KRT4P19013 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
KRT4P19013 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.71■■□□□ 1.07
KRT4P19013 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT4P19013 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT4P19013 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT4P19013 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KRT4P19013 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT4P19013 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT4P19013 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.7■■□□□ 1.06
KRT4P19013 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.7■■□□□ 1.06
KRT4P19013 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.7■■□□□ 1.06
KRT4P19013 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KRT4P19013 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.7■■□□□ 1.06
KRT4P19013 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT4P19013 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT4P19013 AF106564.1-201ENST00000607058 2553 ntBASIC21.7■■□□□ 1.06
KRT4P19013 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT4P19013 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.7■■□□□ 1.06
KRT4P19013 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.7■■□□□ 1.06
KRT4P19013 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT4P19013 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
KRT4P19013 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
KRT4P19013 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT4P19013 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.69■■□□□ 1.06
KRT4P19013 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.69■■□□□ 1.06
KRT4P19013 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT4P19013 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT4P19013 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT4P19013 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT4P19013 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT4P19013 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT4P19013 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT4P19013 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT4P19013 KRT8P33-201ENST00000508125 1423 ntBASIC21.68■■□□□ 1.06
KRT4P19013 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT4P19013 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
KRT4P19013 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT4P19013 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT4P19013 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT4P19013 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT4P19013 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT4P19013 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KRT4P19013 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT4P19013 YBX1P4-201ENST00000392794 808 ntBASIC21.67■■□□□ 1.06
KRT4P19013 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
KRT4P19013 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT4P19013 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT4P19013 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
KRT4P19013 FEM1AP4-201ENST00000443167 1987 ntBASIC21.67■■□□□ 1.06
KRT4P19013 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
KRT4P19013 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT4P19013 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT4P19013 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
KRT4P19013 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT4P19013 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KRT4P19013 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT4P19013 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT4P19013 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
KRT4P19013 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT4P19013 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KRT4P19013 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
KRT4P19013 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms