Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 AC144652.1-201ENST00000609974 1624 ntBASIC19.41■□□□□ 0.7
HLA-DPB1P04440 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 MIR6722-201ENST00000617286 78 ntBASIC19.41■□□□□ 0.7
HLA-DPB1P04440 AC005229.4-201ENST00000610085 2198 ntBASIC19.41■□□□□ 0.7
HLA-DPB1P04440 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DPB1P04440 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DPB1P04440 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HLA-DPB1P04440 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DPB1P04440 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DPB1P04440 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.39■□□□□ 0.7
HLA-DPB1P04440 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DPB1P04440 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 AC244015.2-201ENST00000616358 1861 ntBASIC19.39■□□□□ 0.69
HLA-DPB1P04440 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPB1P04440 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HLA-DPB1P04440 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 KRT16P3-201ENST00000439127 1283 ntBASIC19.37■□□□□ 0.69
HLA-DPB1P04440 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DPB1P04440 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 AC073130.3-201ENST00000624389 2278 ntBASIC19.36■□□□□ 0.69
HLA-DPB1P04440 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DPB1P04440 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms