Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLDN1O95832 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.33■□□□□ 0.69
CLDN1O95832 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN1O95832 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLDN1O95832 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN1O95832 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLDN1O95832 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLDN1O95832 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN1O95832 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 DUX4L16-201ENST00000555130 1264 ntBASIC19.33■□□□□ 0.68
CLDN1O95832 AC098934.4-201ENST00000564127 592 ntBASIC19.33■□□□□ 0.68
CLDN1O95832 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.33■□□□□ 0.68
CLDN1O95832 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN1O95832 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLDN1O95832 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN1O95832 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.33■□□□□ 0.68
CLDN1O95832 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN1O95832 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN1O95832 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 PRORSD1P-201ENST00000295112 541 ntBASIC19.32■□□□□ 0.68
CLDN1O95832 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLDN1O95832 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN1O95832 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLDN1O95832 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN1O95832 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN1O95832 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN1O95832 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN1O95832 FP325331.1-202ENST00000623531 1380 ntBASIC19.32■□□□□ 0.68
CLDN1O95832 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN1O95832 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN1O95832 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN1O95832 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN1O95832 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN1O95832 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN1O95832 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.31■□□□□ 0.68
CLDN1O95832 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN1O95832 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN1O95832 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 RPS2P52-201ENST00000469610 820 ntBASIC19.3■□□□□ 0.68
CLDN1O95832 AC079140.4-201ENST00000507448 529 ntBASIC19.3■□□□□ 0.68
CLDN1O95832 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN1O95832 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN1O95832 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN1O95832 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN1O95832 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN1O95832 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN1O95832 AC073210.2-201ENST00000430369 194 ntBASIC19.29■□□□□ 0.68
CLDN1O95832 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN1O95832 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.29■□□□□ 0.68
CLDN1O95832 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN1O95832 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN1O95832 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN1O95832 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN1O95832 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN1O95832 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN1O95832 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN1O95832 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN1O95832 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms