Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX30O94993 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX30O94993 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX30O94993 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 C11orf96-202ENST00000528572 1834 ntBASIC20.13■□□□□ 0.81
SOX30O94993 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SOX30O94993 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SOX30O94993 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SOX30O94993 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX30O94993 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 UNC93B3-201ENST00000308076 687 ntBASIC20.13■□□□□ 0.81
SOX30O94993 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SOX30O94993 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX30O94993 BX842568.3-201ENST00000418104 571 ntBASIC20.13■□□□□ 0.81
SOX30O94993 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX30O94993 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX30O94993 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.13■□□□□ 0.81
SOX30O94993 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX30O94993 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.13■□□□□ 0.81
SOX30O94993 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX30O94993 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SOX30O94993 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX30O94993 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX30O94993 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SOX30O94993 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX30O94993 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.12■□□□□ 0.81
SOX30O94993 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX30O94993 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX30O94993 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX30O94993 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX30O94993 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX30O94993 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.12■□□□□ 0.81
SOX30O94993 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX30O94993 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.12■□□□□ 0.81
SOX30O94993 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX30O94993 OR7E47P-201ENST00000546390 1422 ntBASIC20.11■□□□□ 0.81
SOX30O94993 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SOX30O94993 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SOX30O94993 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.11■□□□□ 0.81
SOX30O94993 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX30O94993 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX30O94993 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 AL034346.1-201ENST00000568244 1277 ntBASIC20.11■□□□□ 0.81
SOX30O94993 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX30O94993 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SOX30O94993 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.1■□□□□ 0.81
SOX30O94993 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.1■□□□□ 0.81
SOX30O94993 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SOX30O94993 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.1■□□□□ 0.81
SOX30O94993 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SOX30O94993 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SOX30O94993 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SOX30O94993 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SOX30O94993 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 AC135279.3-201ENST00000610945 1311 ntBASIC20.09■□□□□ 0.81
SOX30O94993 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SOX30O94993 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SOX30O94993 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 AL139246.5-201ENST00000606645 996 ntBASIC20.09■□□□□ 0.81
SOX30O94993 AC233992.3-201ENST00000607491 485 ntBASIC20.09■□□□□ 0.81
SOX30O94993 AL136162.1-201ENST00000607711 1078 ntBASIC20.09■□□□□ 0.81
SOX30O94993 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SOX30O94993 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SOX30O94993 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SOX30O94993 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SOX30O94993 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SOX30O94993 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SOX30O94993 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SOX30O94993 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SOX30O94993 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 262.5 ms