Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
SMAD9O15198 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.6■□□□□ 0.73
SMAD9O15198 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMAD9O15198 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD9O15198 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD9O15198 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD9O15198 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD9O15198 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMAD9O15198 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMAD9O15198 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD9O15198 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMAD9O15198 AC126544.1-201ENST00000580842 1059 ntBASIC19.59■□□□□ 0.73
SMAD9O15198 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.59■□□□□ 0.73
SMAD9O15198 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD9O15198 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.59■□□□□ 0.73
SMAD9O15198 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SMAD9O15198 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMAD9O15198 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD9O15198 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMAD9O15198 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.59■□□□□ 0.73
SMAD9O15198 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD9O15198 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SMAD9O15198 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD9O15198 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SMAD9O15198 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD9O15198 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMAD9O15198 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMAD9O15198 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD9O15198 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.58■□□□□ 0.72
SMAD9O15198 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SMAD9O15198 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SMAD9O15198 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SMAD9O15198 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.57■□□□□ 0.72
SMAD9O15198 AP005435.1-201ENST00000529293 1178 ntBASIC19.57■□□□□ 0.72
SMAD9O15198 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.57■□□□□ 0.72
SMAD9O15198 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SMAD9O15198 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMAD9O15198 C1orf229-201ENST00000623686 2258 ntBASIC19.56■□□□□ 0.72
SMAD9O15198 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.56■□□□□ 0.72
SMAD9O15198 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.56■□□□□ 0.72
SMAD9O15198 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.56■□□□□ 0.72
SMAD9O15198 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.56■□□□□ 0.72
SMAD9O15198 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SMAD9O15198 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 AC068587.7-201ENST00000641602 218 ntBASIC19.56■□□□□ 0.72
SMAD9O15198 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMAD9O15198 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SMAD9O15198 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.55■□□□□ 0.72
SMAD9O15198 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 IGHV3-19-201ENST00000521488 291 ntBASIC19.55■□□□□ 0.72
SMAD9O15198 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMAD9O15198 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD9O15198 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SMAD9O15198 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SMAD9O15198 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SMAD9O15198 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMAD9O15198 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD9O15198 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
SMAD9O15198 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD9O15198 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.54■□□□□ 0.72
SMAD9O15198 AC105265.2-201ENST00000467189 838 ntBASIC19.54■□□□□ 0.72
SMAD9O15198 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.54■□□□□ 0.72
SMAD9O15198 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.54■□□□□ 0.72
SMAD9O15198 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.54■□□□□ 0.72
SMAD9O15198 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.54■□□□□ 0.72
SMAD9O15198 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMAD9O15198 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.53■□□□□ 0.72
SMAD9O15198 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms