Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LRIT2A6NDA9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIT2A6NDA9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRIT2A6NDA9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRIT2A6NDA9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRIT2A6NDA9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.67■□□□□ 0.9
LRIT2A6NDA9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRIT2A6NDA9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 AC092053.2-201ENST00000640557 1818 ntBASIC20.65■□□□□ 0.9
LRIT2A6NDA9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 TSPY26P-201ENST00000476365 1326 ntBASIC20.65■□□□□ 0.9
LRIT2A6NDA9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRIT2A6NDA9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.64■□□□□ 0.9
LRIT2A6NDA9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRIT2A6NDA9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRIT2A6NDA9 OR7E47P-201ENST00000546390 1422 ntBASIC20.64■□□□□ 0.89
LRIT2A6NDA9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRIT2A6NDA9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRIT2A6NDA9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 AC079834.2-201ENST00000609776 1949 ntBASIC20.62■□□□□ 0.89
LRIT2A6NDA9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRIT2A6NDA9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRIT2A6NDA9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms