Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 AL353593.1-201ENST00000602517 3955 ntBASIC13.15□□□□□ -0.3
MCF2LO15068 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 AP002008.2-201ENST00000635926 4870 ntBASIC13.15□□□□□ -0.3
MCF2LO15068 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
MCF2LO15068 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
MCF2LO15068 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC13.15□□□□□ -0.3
MCF2LO15068 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.15□□□□□ -0.3
MCF2LO15068 ACTG1P23-201ENST00000437653 1074 ntBASIC13.15□□□□□ -0.3
MCF2LO15068 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 AC113340.1-201ENST00000475257 636 ntBASIC13.15□□□□□ -0.3
MCF2LO15068 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.15□□□□□ -0.3
MCF2LO15068 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC13.15□□□□□ -0.3
MCF2LO15068 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.15□□□□□ -0.3
MCF2LO15068 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13.15□□□□□ -0.3
MCF2LO15068 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC13.15□□□□□ -0.3
MCF2LO15068 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.15□□□□□ -0.3
MCF2LO15068 AC011462.4-201ENST00000616866 449 ntBASIC13.15□□□□□ -0.3
MCF2LO15068 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC13.15□□□□□ -0.3
MCF2LO15068 GTF2IP20-203ENST00000634905 2966 ntTSL 5 BASIC13.15□□□□□ -0.3
MCF2LO15068 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC13.15□□□□□ -0.3
MCF2LO15068 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
MCF2LO15068 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MCF2LO15068 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MCF2LO15068 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC13.14□□□□□ -0.31
MCF2LO15068 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC13.14□□□□□ -0.31
MCF2LO15068 RN7SKP212-201ENST00000410851 328 ntBASIC13.14□□□□□ -0.31
MCF2LO15068 AC083873.1-201ENST00000421179 1099 ntBASIC13.14□□□□□ -0.31
MCF2LO15068 AP000346.2-202ENST00000425948 383 ntBASIC13.14□□□□□ -0.31
MCF2LO15068 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.14□□□□□ -0.31
MCF2LO15068 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MCF2LO15068 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.14□□□□□ -0.31
MCF2LO15068 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.14□□□□□ -0.31
MCF2LO15068 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
MCF2LO15068 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MCF2LO15068 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MCF2LO15068 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
MCF2LO15068 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 PKMP1-201ENST00000455804 1523 ntBASIC13.13□□□□□ -0.31
MCF2LO15068 LINC00923-201ENST00000503768 2036 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 ZNF483-203ENST00000358151 2433 ntTSL 2 BASIC13.13□□□□□ -0.31
MCF2LO15068 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
MCF2LO15068 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 LRRC37A7P-201ENST00000583900 2759 ntBASIC13.13□□□□□ -0.31
MCF2LO15068 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 AC018521.1-202ENST00000641877 2655 ntBASIC13.13□□□□□ -0.31
MCF2LO15068 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC13.13□□□□□ -0.31
MCF2LO15068 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
MCF2LO15068 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
MCF2LO15068 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MCF2LO15068 SNORA52-201ENST00000362915 134 ntBASIC13.13□□□□□ -0.31
MCF2LO15068 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms