Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC1A1P43005 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AQP7-207ENST00000447660 998 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC13.09□□□□□ -0.31
SLC1A1P43005 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 RN7SL646P-201ENST00000492969 297 ntBASIC13.09□□□□□ -0.31
SLC1A1P43005 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SLC1A1P43005 SAA2-204ENST00000528349 948 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC1A1P43005 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC092301.1-201ENST00000601618 764 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC1A1P43005 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 MEI1-201ENST00000401548 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 CSPG4P13-202ENST00000567704 4801 ntBASIC13.09□□□□□ -0.31
SLC1A1P43005 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC1A1P43005 HERC2P9-206ENST00000529624 5187 ntBASIC13.09□□□□□ -0.31
SLC1A1P43005 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SLC1A1P43005 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC1A1P43005 MAGEA11-201ENST00000333104 1845 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SLC1A1P43005 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SLC1A1P43005 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC13.08□□□□□ -0.31
SLC1A1P43005 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC13.08□□□□□ -0.31
SLC1A1P43005 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
SLC1A1P43005 ADAM1B-201ENST00000454683 2000 ntBASIC13.08□□□□□ -0.31
SLC1A1P43005 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 NTM-206ENST00000427481 2583 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 AC010536.1-201ENST00000538868 2611 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 PRSS3-204ENST00000429677 786 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 PSME2P2-201ENST00000453033 700 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 AC024293.1-201ENST00000467930 498 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 AC067942.1-202ENST00000471756 1057 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 KRT18P42-201ENST00000505048 1255 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 HNRNPA1P50-201ENST00000546565 928 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.08□□□□□ -0.32
SLC1A1P43005 KRT18P7-201ENST00000557241 1219 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.08□□□□□ -0.32
SLC1A1P43005 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 BCAR3-203ENST00000370244 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SLC1A1P43005 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SLC1A1P43005 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.08□□□□□ -0.32
SLC1A1P43005 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
SLC1A1P43005 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 OAS1-203ENST00000452357 1990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC13.07□□□□□ -0.32
SLC1A1P43005 PHACTR3-203ENST00000361300 2162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SLC1A1P43005 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC13.07□□□□□ -0.32
SLC1A1P43005 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms