Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MTHFRP42898 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
MTHFRP42898 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MTHFRP42898 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 LILRA4-201ENST00000291759 1944 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MTHFRP42898 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
MTHFRP42898 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC13.11□□□□□ -0.31
MTHFRP42898 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
MTHFRP42898 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC13.11□□□□□ -0.31
MTHFRP42898 ACTBP1-201ENST00000417985 1113 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 MTND6P14-201ENST00000433044 522 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC13.11□□□□□ -0.31
MTHFRP42898 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 DEFA8P-201ENST00000457582 285 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 RN7SL255P-201ENST00000470639 296 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 OARD1-214ENST00000486443 764 ntTSL 3 BASIC13.11□□□□□ -0.31
MTHFRP42898 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC13.11□□□□□ -0.31
MTHFRP42898 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC13.11□□□□□ -0.31
MTHFRP42898 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
MTHFRP42898 CHORDC2P-201ENST00000557601 1090 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 AC027237.4-201ENST00000560870 694 ntTSL 3 BASIC13.11□□□□□ -0.31
MTHFRP42898 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 MIR4294-201ENST00000584548 76 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 MIR4761-201ENST00000585066 82 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 AC004134.1-201ENST00000587835 225 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC13.11□□□□□ -0.31
MTHFRP42898 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC13.11□□□□□ -0.31
MTHFRP42898 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 HLA-DQA2-210ENST00000374940 1524 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
MTHFRP42898 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.11□□□□□ -0.31
MTHFRP42898 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 PGAP2-235ENST00000532523 1696 ntTSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 HSPA8P9-201ENST00000485881 1943 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.11□□□□□ -0.31
MTHFRP42898 AC022497.1-201ENST00000624916 3691 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 AC106818.1-201ENST00000623223 3242 ntBASIC13.11□□□□□ -0.31
MTHFRP42898 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MTHFRP42898 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MTHFRP42898 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
MTHFRP42898 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC13.1□□□□□ -0.31
MTHFRP42898 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 U3.49-201ENST00000391065 214 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 HLA-DQB1-203ENST00000399082 1219 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AP005901.1-201ENST00000508721 1181 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 HNRNPA1P7-201ENST00000521273 963 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC13.1□□□□□ -0.31
MTHFRP42898 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC006111.1-201ENST00000573982 329 ntTSL 3 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC125494.1-202ENST00000586338 723 ntTSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC245884.8-201ENST00000599382 880 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC13.1□□□□□ -0.31
MTHFRP42898 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC13.1□□□□□ -0.31
MTHFRP42898 AC093323.3-201ENST00000632627 949 ntBASIC13.1□□□□□ -0.31
MTHFRP42898 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MTHFRP42898 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MTHFRP42898 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms