Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGA7Q9Y5G6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHGA7Q9Y5G6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.52■■□□□ 1.03
PCDHGA7Q9Y5G6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 YBX1P1-201ENST00000445822 960 ntBASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGA7Q9Y5G6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGA7Q9Y5G6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 AC126544.1-201ENST00000580842 1059 ntBASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 RARRES2P11-201ENST00000635158 484 ntBASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGA7Q9Y5G6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA7Q9Y5G6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 AC022517.1-201ENST00000592429 346 ntBASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA7Q9Y5G6 AL024507.2-201ENST00000606070 2574 ntBASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 AC090192.1-201ENST00000517740 490 ntBASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 pRNA.6-201ENST00000610482 90 ntBASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 pRNA.5-201ENST00000612139 90 ntBASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 pRNA.11-201ENST00000618423 90 ntBASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 pRNA.13-201ENST00000619112 90 ntBASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGA7Q9Y5G6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHGA7Q9Y5G6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms