Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM2Q9Y333 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM2Q9Y333 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LSM2Q9Y333 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LSM2Q9Y333 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM2Q9Y333 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM2Q9Y333 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM2Q9Y333 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 KRT18P24-201ENST00000344739 1156 ntBASIC19.34■□□□□ 0.69
LSM2Q9Y333 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.34■□□□□ 0.69
LSM2Q9Y333 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM2Q9Y333 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM2Q9Y333 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM2Q9Y333 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM2Q9Y333 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
LSM2Q9Y333 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSM2Q9Y333 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSM2Q9Y333 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSM2Q9Y333 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LSM2Q9Y333 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.33■□□□□ 0.68
LSM2Q9Y333 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
LSM2Q9Y333 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM2Q9Y333 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM2Q9Y333 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSM2Q9Y333 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 SNX5-217ENST00000606557 1087 ntBASIC19.32■□□□□ 0.68
LSM2Q9Y333 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM2Q9Y333 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LSM2Q9Y333 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM2Q9Y333 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LSM2Q9Y333 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LSM2Q9Y333 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM2Q9Y333 DUX4L4-201ENST00000566884 1269 ntBASIC19.31■□□□□ 0.68
LSM2Q9Y333 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.31■□□□□ 0.68
LSM2Q9Y333 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM2Q9Y333 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM2Q9Y333 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM2Q9Y333 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.31■□□□□ 0.68
LSM2Q9Y333 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.31■□□□□ 0.68
LSM2Q9Y333 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM2Q9Y333 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.3■□□□□ 0.68
LSM2Q9Y333 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
LSM2Q9Y333 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.3■□□□□ 0.68
LSM2Q9Y333 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.3■□□□□ 0.68
LSM2Q9Y333 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 U85056.1-201ENST00000616429 682 ntBASIC19.3■□□□□ 0.68
LSM2Q9Y333 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LSM2Q9Y333 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LSM2Q9Y333 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM2Q9Y333 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM2Q9Y333 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM2Q9Y333 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM2Q9Y333 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM2Q9Y333 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM2Q9Y333 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM2Q9Y333 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM2Q9Y333 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM2Q9Y333 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM2Q9Y333 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LSM2Q9Y333 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms