Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR3Q9UNL2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
SSR3Q9UNL2 AL157384.1-201ENST00000445995 2473 ntBASIC19.34■□□□□ 0.69
SSR3Q9UNL2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 Z98882.1-201ENST00000622160 2253 ntBASIC19.34■□□□□ 0.69
SSR3Q9UNL2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 LINC01960-201ENST00000563759 1884 ntBASIC19.34■□□□□ 0.69
SSR3Q9UNL2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR3Q9UNL2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR3Q9UNL2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 LONRF2P2-201ENST00000439212 571 ntBASIC19.33■□□□□ 0.68
SSR3Q9UNL2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR3Q9UNL2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSR3Q9UNL2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 SPCS2P3-201ENST00000500401 656 ntBASIC19.31■□□□□ 0.68
SSR3Q9UNL2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.31■□□□□ 0.68
SSR3Q9UNL2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 MIR6765-201ENST00000614092 87 ntBASIC19.3■□□□□ 0.68
SSR3Q9UNL2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SSR3Q9UNL2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms