Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB3IPQ96QF0 LINC01006-201ENST00000333319 2292 ntBASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 AF106564.1-201ENST00000607058 2553 ntBASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB3IPQ96QF0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 MIR3648-2-201ENST00000581792 180 ntBASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 MIR3648-1-201ENST00000615959 180 ntBASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB3IPQ96QF0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB3IPQ96QF0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.15■□□□□ 0.98
RAB3IPQ96QF0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IPQ96QF0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IPQ96QF0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB3IPQ96QF0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 AC093536.1-201ENST00000569153 554 ntBASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 AL391422.3-201ENST00000603791 2761 ntBASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.14■□□□□ 0.97
RAB3IPQ96QF0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 AC131274.2-201ENST00000580697 1507 ntBASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB3IPQ96QF0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms