Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
NEK1Q96PY6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK1Q96PY6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK1Q96PY6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NEK1Q96PY6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NEK1Q96PY6 MIR4767-201ENST00000582827 78 ntBASIC25.8■■□□□ 1.72
NEK1Q96PY6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.8■■□□□ 1.72
NEK1Q96PY6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NEK1Q96PY6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK1Q96PY6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NEK1Q96PY6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
NEK1Q96PY6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NEK1Q96PY6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NEK1Q96PY6 MIR935-201ENST00000401179 91 ntBASIC25.79■■□□□ 1.72
NEK1Q96PY6 AC096631.2-201ENST00000436136 790 ntBASIC25.79■■□□□ 1.72
NEK1Q96PY6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
NEK1Q96PY6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NEK1Q96PY6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
NEK1Q96PY6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NEK1Q96PY6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
NEK1Q96PY6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.78■■□□□ 1.72
NEK1Q96PY6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NEK1Q96PY6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
NEK1Q96PY6 AC079089.2-201ENST00000531211 1277 ntBASIC25.78■■□□□ 1.72
NEK1Q96PY6 LINC00565-201ENST00000562710 2331 ntBASIC25.77■■□□□ 1.72
NEK1Q96PY6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.77■■□□□ 1.72
NEK1Q96PY6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
NEK1Q96PY6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK1Q96PY6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.77■■□□□ 1.72
NEK1Q96PY6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.77■■□□□ 1.72
NEK1Q96PY6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK1Q96PY6 AC135279.3-201ENST00000610945 1311 ntBASIC25.77■■□□□ 1.72
NEK1Q96PY6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK1Q96PY6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NEK1Q96PY6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
NEK1Q96PY6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
NEK1Q96PY6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
NEK1Q96PY6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.76■■□□□ 1.71
NEK1Q96PY6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.76■■□□□ 1.71
NEK1Q96PY6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.76■■□□□ 1.71
NEK1Q96PY6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 C11orf96-202ENST00000528572 1834 ntBASIC25.76■■□□□ 1.71
NEK1Q96PY6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
NEK1Q96PY6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NEK1Q96PY6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.75■■□□□ 1.71
NEK1Q96PY6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NEK1Q96PY6 AC010141.3-201ENST00000456659 717 ntBASIC25.75■■□□□ 1.71
NEK1Q96PY6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.75■■□□□ 1.71
NEK1Q96PY6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NEK1Q96PY6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NEK1Q96PY6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NEK1Q96PY6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
NEK1Q96PY6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.74■■□□□ 1.71
NEK1Q96PY6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NEK1Q96PY6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.74■■□□□ 1.71
NEK1Q96PY6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.74■■□□□ 1.71
NEK1Q96PY6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.74■■□□□ 1.71
NEK1Q96PY6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NEK1Q96PY6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.74■■□□□ 1.71
NEK1Q96PY6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NEK1Q96PY6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
NEK1Q96PY6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
NEK1Q96PY6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NEK1Q96PY6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.73■■□□□ 1.71
NEK1Q96PY6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.73■■□□□ 1.71
NEK1Q96PY6 BX842568.3-201ENST00000418104 571 ntBASIC25.73■■□□□ 1.71
NEK1Q96PY6 PBX2P1-201ENST00000493219 1291 ntBASIC25.73■■□□□ 1.71
NEK1Q96PY6 AP005435.1-201ENST00000529293 1178 ntBASIC25.73■■□□□ 1.71
NEK1Q96PY6 AC087239.1-201ENST00000622671 572 ntBASIC25.73■■□□□ 1.71
NEK1Q96PY6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NEK1Q96PY6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
NEK1Q96PY6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms