Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.87■□□□□ 0.61
SEH1LQ96EE3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.86■□□□□ 0.61
SEH1LQ96EE3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SEH1LQ96EE3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEH1LQ96EE3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.86■□□□□ 0.61
SEH1LQ96EE3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.86■□□□□ 0.61
SEH1LQ96EE3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SEH1LQ96EE3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEH1LQ96EE3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEH1LQ96EE3 AC144652.1-201ENST00000609974 1624 ntBASIC18.83■□□□□ 0.61
SEH1LQ96EE3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 AL512631.2-201ENST00000604634 923 ntBASIC18.83■□□□□ 0.6
SEH1LQ96EE3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.83■□□□□ 0.6
SEH1LQ96EE3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 MIR4466-201ENST00000606121 54 ntBASIC18.82■□□□□ 0.6
SEH1LQ96EE3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 C17orf82-201ENST00000623772 1530 ntBASIC18.82■□□□□ 0.6
SEH1LQ96EE3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SEH1LQ96EE3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEH1LQ96EE3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SEH1LQ96EE3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms