Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 AL358852.1-201ENST00000623174 1268 ntBASIC19.49■□□□□ 0.71
CPNE4Q96A23 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 AC133561.1-201ENST00000568600 2415 ntBASIC19.49■□□□□ 0.71
CPNE4Q96A23 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 AL354811.1-201ENST00000610286 706 ntBASIC19.48■□□□□ 0.71
CPNE4Q96A23 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE4Q96A23 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE4Q96A23 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE4Q96A23 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE4Q96A23 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE4Q96A23 ESRRAP2-201ENST00000418437 1549 ntBASIC19.47■□□□□ 0.71
CPNE4Q96A23 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CPNE4Q96A23 AC105233.4-201ENST00000642045 216 ntBASIC19.47■□□□□ 0.71
CPNE4Q96A23 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE4Q96A23 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE4Q96A23 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE4Q96A23 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPNE4Q96A23 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPNE4Q96A23 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE4Q96A23 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE4Q96A23 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE4Q96A23 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE4Q96A23 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 AC012414.1-201ENST00000556676 535 ntBASIC19.46■□□□□ 0.71
CPNE4Q96A23 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE4Q96A23 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE4Q96A23 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE4Q96A23 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE4Q96A23 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPNE4Q96A23 AC087742.1-201ENST00000575880 1738 ntBASIC19.45■□□□□ 0.7
CPNE4Q96A23 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE4Q96A23 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE4Q96A23 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE4Q96A23 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.45■□□□□ 0.7
CPNE4Q96A23 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 C9orf163-202ENST00000624034 2573 ntBASIC19.45■□□□□ 0.7
CPNE4Q96A23 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE4Q96A23 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE4Q96A23 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE4Q96A23 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE4Q96A23 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE4Q96A23 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.44■□□□□ 0.7
CPNE4Q96A23 AC079089.2-201ENST00000531211 1277 ntBASIC19.44■□□□□ 0.7
CPNE4Q96A23 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE4Q96A23 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE4Q96A23 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE4Q96A23 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE4Q96A23 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CPNE4Q96A23 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE4Q96A23 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE4Q96A23 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE4Q96A23 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms