Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 AC004448.1-201ENST00000458332 883 ntBASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMIM4Q8WVI0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 MIR6765-201ENST00000614092 87 ntBASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM4Q8WVI0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SMIM4Q8WVI0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SMIM4Q8WVI0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM4Q8WVI0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM4Q8WVI0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM4Q8WVI0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM4Q8WVI0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SMIM4Q8WVI0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM4Q8WVI0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM4Q8WVI0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM4Q8WVI0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.57■□□□□ 0.56
SMIM4Q8WVI0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 LINC01006-201ENST00000333319 2292 ntBASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 CA15P2-201ENST00000611168 834 ntBASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 LINC01529-204ENST00000636474 1715 ntBASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMIM4Q8WVI0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMIM4Q8WVI0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 AF131216.4-201ENST00000638924 1588 ntBASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms