Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM42Q8IWZ5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TRIM42Q8IWZ5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM42Q8IWZ5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRIM42Q8IWZ5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM42Q8IWZ5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRIM42Q8IWZ5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRIM42Q8IWZ5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 YBX1P4-201ENST00000392794 808 ntBASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM42Q8IWZ5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.58■■□□□ 1.04
TRIM42Q8IWZ5 AC005229.4-201ENST00000610085 2198 ntBASIC21.58■■□□□ 1.04
TRIM42Q8IWZ5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TRIM42Q8IWZ5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM42Q8IWZ5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM42Q8IWZ5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 AC103834.1-201ENST00000520383 144 ntBASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM42Q8IWZ5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 SNX5-217ENST00000606557 1087 ntBASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 CA15P2-201ENST00000611168 834 ntBASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM42Q8IWZ5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM42Q8IWZ5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms