Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF546Q86UE3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ZNF546Q86UE3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 LINC01006-201ENST00000333319 2292 ntBASIC18.02■□□□□ 0.48
ZNF546Q86UE3 AF106564.1-201ENST00000607058 2553 ntBASIC18.02■□□□□ 0.48
ZNF546Q86UE3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ZNF546Q86UE3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF546Q86UE3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 AC022413.1-201ENST00000624602 984 ntBASIC18.01■□□□□ 0.47
ZNF546Q86UE3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF546Q86UE3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18■□□□□ 0.47
ZNF546Q86UE3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18■□□□□ 0.47
ZNF546Q86UE3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18■□□□□ 0.47
ZNF546Q86UE3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18■□□□□ 0.47
ZNF546Q86UE3 RAP2CP1-202ENST00000605179 643 ntBASIC18■□□□□ 0.47
ZNF546Q86UE3 FEM1AP4-201ENST00000443167 1987 ntBASIC18■□□□□ 0.47
ZNF546Q86UE3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18■□□□□ 0.47
ZNF546Q86UE3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 Z98882.1-201ENST00000622160 2253 ntBASIC18■□□□□ 0.47
ZNF546Q86UE3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF546Q86UE3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF546Q86UE3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF546Q86UE3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms