Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.02■■□□□ 1.44
RSPH3Q86UC2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
RSPH3Q86UC2 DUSP8P3-201ENST00000399571 1760 ntBASIC24.01■■□□□ 1.43
RSPH3Q86UC2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RSPH3Q86UC2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RSPH3Q86UC2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24■■□□□ 1.43
RSPH3Q86UC2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24■■□□□ 1.43
RSPH3Q86UC2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24■■□□□ 1.43
RSPH3Q86UC2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RSPH3Q86UC2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RSPH3Q86UC2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RSPH3Q86UC2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RSPH3Q86UC2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24■■□□□ 1.43
RSPH3Q86UC2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24■■□□□ 1.43
RSPH3Q86UC2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RSPH3Q86UC2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 BID-214ENST00000617586 542 ntTSL 5 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.98■■□□□ 1.43
RSPH3Q86UC2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.97■■□□□ 1.43
RSPH3Q86UC2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RSPH3Q86UC2 AC009237.3-201ENST00000393279 1427 ntBASIC23.97■■□□□ 1.43
RSPH3Q86UC2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RSPH3Q86UC2 KRT18P11-201ENST00000435214 1283 ntBASIC23.97■■□□□ 1.43
RSPH3Q86UC2 ANOS2P-203ENST00000472227 1816 ntBASIC23.97■■□□□ 1.43
RSPH3Q86UC2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.97■■□□□ 1.43
RSPH3Q86UC2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RSPH3Q86UC2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RSPH3Q86UC2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.96■■□□□ 1.43
RSPH3Q86UC2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
RSPH3Q86UC2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 AC092068.2-201ENST00000590491 1708 ntBASIC23.95■■□□□ 1.42
RSPH3Q86UC2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.95■■□□□ 1.42
RSPH3Q86UC2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 AC073111.5-205ENST00000641717 521 ntBASIC23.94■■□□□ 1.42
RSPH3Q86UC2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RSPH3Q86UC2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RSPH3Q86UC2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RSPH3Q86UC2 AC005224.4-201ENST00000583262 1652 ntBASIC23.93■■□□□ 1.42
RSPH3Q86UC2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RSPH3Q86UC2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.93■■□□□ 1.42
RSPH3Q86UC2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 303.1 ms