Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC139530.1-201ENST00000575312 1977 ntBASIC21.88■■□□□ 1.09
PRAMEP78395 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEP78395 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PRAMEP78395 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.87■■□□□ 1.09
PRAMEP78395 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 SERBP1P1-201ENST00000396021 1160 ntBASIC21.87■■□□□ 1.09
PRAMEP78395 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PRAMEP78395 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.87■■□□□ 1.09
PRAMEP78395 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEP78395 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PRAMEP78395 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEP78395 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 AC092053.2-201ENST00000640557 1818 ntBASIC21.87■■□□□ 1.09
PRAMEP78395 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEP78395 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.87■■□□□ 1.09
PRAMEP78395 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEP78395 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PRAMEP78395 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEP78395 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEP78395 AL138724.1-201ENST00000606771 1088 ntBASIC21.86■■□□□ 1.09
PRAMEP78395 CA15P2-201ENST00000611168 834 ntBASIC21.86■■□□□ 1.09
PRAMEP78395 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PRAMEP78395 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.86■■□□□ 1.09
PRAMEP78395 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 AC137767.1-201ENST00000602918 1920 ntBASIC21.86■■□□□ 1.09
PRAMEP78395 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEP78395 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.85■■□□□ 1.09
PRAMEP78395 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PRAMEP78395 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEP78395 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEP78395 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEP78395 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PRAMEP78395 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PRAMEP78395 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEP78395 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
PRAMEP78395 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRAMEP78395 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.85■■□□□ 1.09
PRAMEP78395 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEP78395 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEP78395 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PRAMEP78395 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 OR2I1P-207ENST00000453522 948 ntBASIC21.84■■□□□ 1.09
PRAMEP78395 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PRAMEP78395 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
PRAMEP78395 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.84■■□□□ 1.09
PRAMEP78395 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
PRAMEP78395 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRAMEP78395 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEP78395 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PRAMEP78395 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEP78395 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.83■■□□□ 1.09
PRAMEP78395 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
PRAMEP78395 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.83■■□□□ 1.09
PRAMEP78395 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PRAMEP78395 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEP78395 AL031602.1-201ENST00000633169 911 ntBASIC21.83■■□□□ 1.09
PRAMEP78395 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
PRAMEP78395 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRAMEP78395 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEP78395 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEP78395 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRAMEP78395 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.82■■□□□ 1.08
PRAMEP78395 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.82■■□□□ 1.08
PRAMEP78395 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRAMEP78395 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PRAMEP78395 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.81■■□□□ 1.08
PRAMEP78395 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAMEP78395 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.81■■□□□ 1.08
PRAMEP78395 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEP78395 AC011298.3-201ENST00000615796 283 ntBASIC21.81■■□□□ 1.08
PRAMEP78395 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms