Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
AP1S2P56377 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 AC010141.3-201ENST00000456659 717 ntBASIC21.19■□□□□ 0.98
AP1S2P56377 AP005435.1-201ENST00000529293 1178 ntBASIC21.19■□□□□ 0.98
AP1S2P56377 AC079089.2-201ENST00000531211 1277 ntBASIC21.19■□□□□ 0.98
AP1S2P56377 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
AP1S2P56377 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 AC135279.3-201ENST00000610945 1311 ntBASIC21.19■□□□□ 0.98
AP1S2P56377 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
AP1S2P56377 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
AP1S2P56377 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP1S2P56377 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
AP1S2P56377 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.18■□□□□ 0.98
AP1S2P56377 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.18■□□□□ 0.98
AP1S2P56377 AC024257.2-201ENST00000549699 147 ntBASIC21.18■□□□□ 0.98
AP1S2P56377 MIR4767-201ENST00000582827 78 ntBASIC21.18■□□□□ 0.98
AP1S2P56377 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.18■□□□□ 0.98
AP1S2P56377 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.18■□□□□ 0.98
AP1S2P56377 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.18■□□□□ 0.98
AP1S2P56377 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.18■□□□□ 0.98
AP1S2P56377 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP1S2P56377 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
AP1S2P56377 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.17■□□□□ 0.98
AP1S2P56377 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.17■□□□□ 0.98
AP1S2P56377 BX842568.3-201ENST00000418104 571 ntBASIC21.17■□□□□ 0.98
AP1S2P56377 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.17■□□□□ 0.98
AP1S2P56377 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP1S2P56377 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.16■□□□□ 0.98
AP1S2P56377 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
AP1S2P56377 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.16■□□□□ 0.98
AP1S2P56377 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.16■□□□□ 0.98
AP1S2P56377 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP1S2P56377 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S2P56377 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S2P56377 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S2P56377 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
AP1S2P56377 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S2P56377 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S2P56377 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.15■□□□□ 0.98
AP1S2P56377 AC096631.2-201ENST00000436136 790 ntBASIC21.15■□□□□ 0.98
AP1S2P56377 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.15■□□□□ 0.98
AP1S2P56377 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.15■□□□□ 0.98
AP1S2P56377 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.15■□□□□ 0.98
AP1S2P56377 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.15■□□□□ 0.98
AP1S2P56377 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP1S2P56377 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
AP1S2P56377 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
AP1S2P56377 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.14■□□□□ 0.97
AP1S2P56377 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
AP1S2P56377 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.14■□□□□ 0.97
AP1S2P56377 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.14■□□□□ 0.97
AP1S2P56377 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.14■□□□□ 0.97
AP1S2P56377 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
AP1S2P56377 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP1S2P56377 OXCT2P1-201ENST00000447263 1535 ntBASIC21.14■□□□□ 0.97
AP1S2P56377 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
AP1S2P56377 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S2P56377 C11orf96-202ENST00000528572 1834 ntBASIC21.13■□□□□ 0.97
AP1S2P56377 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
AP1S2P56377 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S2P56377 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
AP1S2P56377 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.13■□□□□ 0.97
AP1S2P56377 AC233992.3-201ENST00000607491 485 ntBASIC21.13■□□□□ 0.97
AP1S2P56377 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP1S2P56377 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.13■□□□□ 0.97
AP1S2P56377 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.13■□□□□ 0.97
AP1S2P56377 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
AP1S2P56377 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S2P56377 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S2P56377 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP1S2P56377 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms