Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR1H2P55055 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR1H2P55055 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NR1H2P55055 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR1H2P55055 AC079630.1-202ENST00000618127 1840 ntBASIC20.5■□□□□ 0.87
NR1H2P55055 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR1H2P55055 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NR1H2P55055 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NR1H2P55055 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.49■□□□□ 0.87
NR1H2P55055 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NR1H2P55055 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.49■□□□□ 0.87
NR1H2P55055 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.49■□□□□ 0.87
NR1H2P55055 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NR1H2P55055 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NR1H2P55055 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NR1H2P55055 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NR1H2P55055 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NR1H2P55055 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.48■□□□□ 0.87
NR1H2P55055 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NR1H2P55055 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NR1H2P55055 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NR1H2P55055 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.48■□□□□ 0.87
NR1H2P55055 UNC93B8-201ENST00000511903 705 ntBASIC20.48■□□□□ 0.87
NR1H2P55055 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
NR1H2P55055 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NR1H2P55055 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.48■□□□□ 0.87
NR1H2P55055 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NR1H2P55055 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR1H2P55055 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.47■□□□□ 0.87
NR1H2P55055 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.47■□□□□ 0.87
NR1H2P55055 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.47■□□□□ 0.87
NR1H2P55055 TSPY9P-201ENST00000440215 945 ntBASIC20.47■□□□□ 0.87
NR1H2P55055 TSPY11P-201ENST00000442607 1045 ntBASIC20.47■□□□□ 0.87
NR1H2P55055 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.47■□□□□ 0.87
NR1H2P55055 AC092028.1-203ENST00000608262 953 ntBASIC20.47■□□□□ 0.87
NR1H2P55055 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR1H2P55055 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR1H2P55055 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NR1H2P55055 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NR1H2P55055 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NR1H2P55055 AC008406.3-201ENST00000620001 1374 ntBASIC20.46■□□□□ 0.87
NR1H2P55055 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NR1H2P55055 AC007952.6-201ENST00000573168 2673 ntBASIC20.46■□□□□ 0.87
NR1H2P55055 AC003957.1-201ENST00000625108 2673 ntBASIC20.46■□□□□ 0.87
NR1H2P55055 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.46■□□□□ 0.87
NR1H2P55055 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.46■□□□□ 0.87
NR1H2P55055 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.46■□□□□ 0.87
NR1H2P55055 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.46■□□□□ 0.87
NR1H2P55055 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NR1H2P55055 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NR1H2P55055 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.45■□□□□ 0.86
NR1H2P55055 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.45■□□□□ 0.86
NR1H2P55055 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NR1H2P55055 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.45■□□□□ 0.86
NR1H2P55055 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.45■□□□□ 0.86
NR1H2P55055 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NR1H2P55055 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.45■□□□□ 0.86
NR1H2P55055 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NR1H2P55055 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR1H2P55055 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.44■□□□□ 0.86
NR1H2P55055 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR1H2P55055 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR1H2P55055 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR1H2P55055 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NR1H2P55055 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.44■□□□□ 0.86
NR1H2P55055 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.44■□□□□ 0.86
NR1H2P55055 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.44■□□□□ 0.86
NR1H2P55055 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
NR1H2P55055 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.44■□□□□ 0.86
NR1H2P55055 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.44■□□□□ 0.86
NR1H2P55055 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NR1H2P55055 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NR1H2P55055 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.43■□□□□ 0.86
NR1H2P55055 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.43■□□□□ 0.86
NR1H2P55055 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.43■□□□□ 0.86
NR1H2P55055 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NR1H2P55055 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NR1H2P55055 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NR1H2P55055 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NR1H2P55055 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms