Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNB2P52799 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNB2P52799 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
EFNB2P52799 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.76■□□□□ 0.59
EFNB2P52799 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNB2P52799 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB2P52799 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB2P52799 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EFNB2P52799 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB2P52799 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
EFNB2P52799 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.75■□□□□ 0.59
EFNB2P52799 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB2P52799 MIR4787-201ENST00000607364 84 ntBASIC18.75■□□□□ 0.59
EFNB2P52799 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EFNB2P52799 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNB2P52799 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
EFNB2P52799 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
EFNB2P52799 AC073130.3-201ENST00000624389 2278 ntBASIC18.75■□□□□ 0.59
EFNB2P52799 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
EFNB2P52799 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.74■□□□□ 0.59
EFNB2P52799 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.74■□□□□ 0.59
EFNB2P52799 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.74■□□□□ 0.59
EFNB2P52799 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.74■□□□□ 0.59
EFNB2P52799 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNB2P52799 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 AC244015.2-201ENST00000616358 1861 ntBASIC18.73■□□□□ 0.59
EFNB2P52799 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
EFNB2P52799 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.73■□□□□ 0.59
EFNB2P52799 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 AC137630.3-201ENST00000607245 391 ntBASIC18.73■□□□□ 0.59
EFNB2P52799 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.73■□□□□ 0.59
EFNB2P52799 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EFNB2P52799 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
EFNB2P52799 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.73■□□□□ 0.59
EFNB2P52799 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.72■□□□□ 0.59
EFNB2P52799 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
EFNB2P52799 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.72■□□□□ 0.59
EFNB2P52799 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.72■□□□□ 0.59
EFNB2P52799 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
EFNB2P52799 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EFNB2P52799 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB2P52799 FP325331.1-202ENST00000623531 1380 ntBASIC18.71■□□□□ 0.59
EFNB2P52799 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.71■□□□□ 0.59
EFNB2P52799 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
EFNB2P52799 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.71■□□□□ 0.59
EFNB2P52799 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.71■□□□□ 0.59
EFNB2P52799 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB2P52799 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
EFNB2P52799 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.71■□□□□ 0.59
EFNB2P52799 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EFNB2P52799 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB2P52799 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB2P52799 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.7■□□□□ 0.58
EFNB2P52799 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.7■□□□□ 0.58
EFNB2P52799 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EFNB2P52799 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms