Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 RNF165-205ENST00000588679 2904 ntBASIC19.46■□□□□ 0.71
SOX6P35712 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SOX6P35712 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.46■□□□□ 0.71
SOX6P35712 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SOX6P35712 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX6P35712 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX6P35712 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SOX6P35712 AC093536.1-201ENST00000569153 554 ntBASIC19.45■□□□□ 0.7
SOX6P35712 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX6P35712 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX6P35712 AL157384.1-201ENST00000445995 2473 ntBASIC19.45■□□□□ 0.7
SOX6P35712 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX6P35712 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX6P35712 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SOX6P35712 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SOX6P35712 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SOX6P35712 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX6P35712 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SOX6P35712 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOX6P35712 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOX6P35712 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX6P35712 AC138932.1-201ENST00000534164 6830 ntBASIC19.43■□□□□ 0.7
SOX6P35712 RARRES2P2-201ENST00000394842 485 ntBASIC19.43■□□□□ 0.7
SOX6P35712 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.43■□□□□ 0.7
SOX6P35712 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SOX6P35712 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SOX6P35712 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX6P35712 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SOX6P35712 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX6P35712 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SOX6P35712 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.42■□□□□ 0.7
SOX6P35712 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.42■□□□□ 0.7
SOX6P35712 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.42■□□□□ 0.7
SOX6P35712 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.42■□□□□ 0.7
SOX6P35712 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SOX6P35712 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.42■□□□□ 0.7
SOX6P35712 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX6P35712 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX6P35712 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX6P35712 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
SOX6P35712 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX6P35712 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX6P35712 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SOX6P35712 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX6P35712 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SOX6P35712 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX6P35712 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SOX6P35712 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX6P35712 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
SOX6P35712 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SOX6P35712 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.4■□□□□ 0.7
SOX6P35712 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.4■□□□□ 0.7
SOX6P35712 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX6P35712 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX6P35712 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SOX6P35712 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SOX6P35712 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SOX6P35712 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX6P35712 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX6P35712 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX6P35712 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SOX6P35712 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX6P35712 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX6P35712 AC007029.1-201ENST00000604183 313 ntBASIC19.39■□□□□ 0.69
SOX6P35712 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX6P35712 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX6P35712 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX6P35712 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SOX6P35712 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SOX6P35712 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SOX6P35712 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SOX6P35712 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms