Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 PRH1-205ENST00000541977 507 ntTSL 214□□□□□ -0.171e-6■■■□□ 18.7
CSTF2P33240 PURA-202ENST00000502351 502 ntTSL 225.93■■□□□ 1.741e-6■■■□□ 18.7
CSTF2P33240 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.361e-6■■■□□ 18.7
CSTF2P33240 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.251e-6■■■□□ 18.7
CSTF2P33240 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.161e-6■■■□□ 18.7
CSTF2P33240 ATXN2-218ENST00000549455 568 ntTSL 414.47□□□□□ -0.091e-6■■■□□ 18.7
CSTF2P33240 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.141e-6■■■□□ 18.7
CSTF2P33240 ATXN2-204ENST00000392645 2842 ntTSL 213.35□□□□□ -0.271e-6■■■□□ 18.7
CSTF2P33240 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.471e-6■■■□□ 18.7
CSTF2P33240 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)11.08□□□□□ -0.641e-6■■■□□ 18.7
CSTF2P33240 DENND1A-211ENST00000491650 842 ntTSL 59.58□□□□□ -0.881e-6■■■□□ 18.7
CSTF2P33240 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC8.48□□□□□ -1.051e-6■■■□□ 18.7
CSTF2P33240 ATP5G2-206ENST00000550241 406 ntTSL 38.38□□□□□ -1.071e-6■■■□□ 18.7
CSTF2P33240 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.331e-6■■■□□ 18.7
CSTF2P33240 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.38□□□□□ -1.391e-6■■■□□ 18.7
CSTF2P33240 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.391e-6■■■□□ 18.7
CSTF2P33240 ATXN2-217ENST00000548492 556 ntTSL 45.82□□□□□ -1.481e-6■■■□□ 18.7
CSTF2P33240 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.551e-6■■■□□ 18.7
CSTF2P33240 PRR4-213ENST00000546265 534 ntTSL 511.46□□□□□ -0.571e-6■■■□□ 18.6
CSTF2P33240 PRR4-208ENST00000541175 384 ntTSL 26.52□□□□□ -1.371e-6■■■□□ 18.6
CSTF2P33240 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.12■□□□□ 0.494e-6■■■□□ 18.6
CSTF2P33240 IP6K1-208ENST00000498149 687 ntTSL 417.34■□□□□ 0.374e-6■■■□□ 18.6
CSTF2P33240 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.14■□□□□ 0.014e-6■■■□□ 18.6
CSTF2P33240 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.44e-6■■■□□ 18.6
CSTF2P33240 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.34□□□□□ -0.434e-6■■■□□ 18.6
CSTF2P33240 IP6K1-209ENST00000613416 4806 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.764e-6■■■□□ 18.6
CSTF2P33240 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.922e-8■■■□□ 18.6
CSTF2P33240 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.332e-8■■■□□ 18.6
CSTF2P33240 AGAP3-219ENST00000485904 683 ntTSL 319.58■□□□□ 0.721e-7■■■□□ 18.6
CSTF2P33240 AGAP3-225ENST00000498559 581 ntTSL 217.74■□□□□ 0.431e-7■■■□□ 18.6
CSTF2P33240 AGAP3-213ENST00000475145 413 ntTSL 211.42□□□□□ -0.581e-7■■■□□ 18.6
CSTF2P33240 KDM7A-202ENST00000472616 7943 ntTSL 1 (best)6.3□□□□□ -1.47e-7■■■□□ 18.6
CSTF2P33240 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.175e-7■■■□□ 18.6
CSTF2P33240 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.21■□□□□ 0.035e-7■■■□□ 18.6
CSTF2P33240 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.175e-7■■■□□ 18.6
CSTF2P33240 MBNL1-209ENST00000460591 898 ntTSL 38.81□□□□□ -15e-7■■■□□ 18.6
CSTF2P33240 MBNL1-212ENST00000464596 989 ntTSL 58.53□□□□□ -1.045e-7■■■□□ 18.6
CSTF2P33240 MBNL1-221ENST00000495875 545 ntTSL 27.6□□□□□ -1.195e-7■■■□□ 18.6
CSTF2P33240 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.79□□□□□ -1.325e-7■■■□□ 18.6
CSTF2P33240 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.54□□□□□ -1.365e-7■■■□□ 18.6
CSTF2P33240 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.54□□□□□ -1.365e-7■■■□□ 18.6
CSTF2P33240 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.385e-7■■■□□ 18.6
CSTF2P33240 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.3□□□□□ -1.565e-7■■■□□ 18.6
CSTF2P33240 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.07□□□□□ -1.765e-7■■■□□ 18.6
CSTF2P33240 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.765e-7■■■□□ 18.6
CSTF2P33240 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.06□□□□□ -1.765e-7■■■□□ 18.6
CSTF2P33240 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.845e-7■■■□□ 18.6
CSTF2P33240 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.54□□□□□ -1.845e-7■■■□□ 18.6
CSTF2P33240 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.44□□□□□ -1.865e-7■■■□□ 18.6
CSTF2P33240 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.251e-7■■■□□ 18.6
CSTF2P33240 ATXN1-206ENST00000483591 892 ntTSL 1 (best)8□□□□□ -1.133e-7■■■□□ 18.6
CSTF2P33240 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)7.42□□□□□ -1.223e-7■■■□□ 18.6
CSTF2P33240 ATXN1-209ENST00000495178 853 ntTSL 1 (best)2.44□□□□□ -2.023e-7■■■□□ 18.6
CSTF2P33240 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.562e-6■■■□□ 18.5
CSTF2P33240 DPY30-206ENST00000446765 1519 ntTSL 53.45□□□□□ -1.862e-6■■■□□ 18.5
CSTF2P33240 FMO5-205ENST00000527849 2410 ntTSL 515.98■□□□□ 0.155e-7■■■□□ 18.5
CSTF2P33240 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.058e-7■■■□□ 18.5
CSTF2P33240 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.083e-6■■■□□ 18.5
CSTF2P33240 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.073e-6■■■□□ 18.5
CSTF2P33240 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 512.67□□□□□ -0.383e-6■■■□□ 18.5
CSTF2P33240 SIK3-203ENST00000415541 3816 ntTSL 1 (best)7.71□□□□□ -1.183e-6■■■□□ 18.5
CSTF2P33240 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.31■■□□□ 1.169e-7■■■□□ 18.5
CSTF2P33240 MAD1L1-215ENST00000464742 449 ntTSL 515.65■□□□□ 0.13e-6■■■□□ 18.5
CSTF2P33240 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.073e-6■■■□□ 18.5
CSTF2P33240 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.5□□□□□ -0.093e-6■■■□□ 18.5
CSTF2P33240 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.213e-6■■■□□ 18.5
CSTF2P33240 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.383e-6■■■□□ 18.5
CSTF2P33240 MAD1L1-214ENST00000459731 371 ntTSL 310.29□□□□□ -0.763e-6■■■□□ 18.5
CSTF2P33240 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.013e-6■■■□□ 18.5
CSTF2P33240 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.44□□□□□ -1.71e-6■■■□□ 18.5
CSTF2P33240 LPP-203ENST00000416784 612 ntTSL 38.46□□□□□ -1.063e-6■■■□□ 18.5
CSTF2P33240 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.16□□□□□ -1.13e-6■■■□□ 18.5
CSTF2P33240 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.843e-6■■■□□ 18.5
CSTF2P33240 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.933e-6■■■□□ 18.5
CSTF2P33240 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.933e-6■■■□□ 18.5
CSTF2P33240 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.113e-6■■■□□ 18.5
CSTF2P33240 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 13e-6■■■□□ 18.5
CSTF2P33240 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.893e-6■■■□□ 18.5
CSTF2P33240 MAGI2-216ENST00000628997 641 ntTSL 313.41□□□□□ -0.263e-6■■■□□ 18.5
CSTF2P33240 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC10.03□□□□□ -0.83e-6■■■□□ 18.5
CSTF2P33240 MAGI2-226ENST00000636424 102 ntTSL 51.81□□□□□ -2.123e-6■■■□□ 18.5
CSTF2P33240 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.1■■□□□ 1.292e-6■■■□□ 18.4
CSTF2P33240 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.062e-6■■■□□ 18.4
CSTF2P33240 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.852e-6■■■□□ 18.4
CSTF2P33240 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.26■□□□□ 0.832e-6■■■□□ 18.4
CSTF2P33240 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.742e-6■■■□□ 18.4
CSTF2P33240 RNF146-209ENST00000608340 512 ntTSL 419.1■□□□□ 0.652e-6■■■□□ 18.4
CSTF2P33240 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.57■□□□□ 0.562e-6■■■□□ 18.4
CSTF2P33240 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.482e-6■■■□□ 18.4
CSTF2P33240 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.482e-6■■■□□ 18.4
CSTF2P33240 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.94■□□□□ 0.462e-6■■■□□ 18.4
CSTF2P33240 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.85■□□□□ 0.452e-6■■■□□ 18.4
CSTF2P33240 DISC1-207ENST00000422590 2939 ntTSL 1 (best)17.71■□□□□ 0.432e-6■■■□□ 18.4
CSTF2P33240 SUN1-209ENST00000424128 633 ntTSL 517.37■□□□□ 0.372e-6■■■□□ 18.4
CSTF2P33240 SUN1-216ENST00000440380 537 ntTSL 517.11■□□□□ 0.332e-6■■■□□ 18.4
CSTF2P33240 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.172e-6■■■□□ 18.4
CSTF2P33240 RNF146-212ENST00000609944 516 ntTSL 515.93■□□□□ 0.142e-6■■■□□ 18.4
CSTF2P33240 RNF146-214ENST00000610162 568 ntTSL 415.84■□□□□ 0.132e-6■■■□□ 18.4
CSTF2P33240 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.52■□□□□ 0.082e-6■■■□□ 18.4
CSTF2P33240 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.042e-6■■■□□ 18.4
Retrieved 100 of 6,735 protein–RNA pairs in 57.2 ms