Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.68■■□□□ 1.7
NCLP19338 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.68■■□□□ 1.7
NCLP19338 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.68■■□□□ 1.7
NCLP19338 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NCLP19338 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.68■■□□□ 1.7
NCLP19338 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
NCLP19338 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NCLP19338 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NCLP19338 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
NCLP19338 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
NCLP19338 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.67■■□□□ 1.7
NCLP19338 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.67■■□□□ 1.7
NCLP19338 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.67■■□□□ 1.7
NCLP19338 SLC25A24-204ENST00000569674 2357 ntBASIC25.67■■□□□ 1.7
NCLP19338 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
NCLP19338 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
NCLP19338 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
NCLP19338 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.66■■□□□ 1.7
NCLP19338 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.66■■□□□ 1.7
NCLP19338 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.66■■□□□ 1.7
NCLP19338 UNC93B8-201ENST00000511903 705 ntBASIC25.66■■□□□ 1.7
NCLP19338 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.66■■□□□ 1.7
NCLP19338 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.66■■□□□ 1.7
NCLP19338 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NCLP19338 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
NCLP19338 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
NCLP19338 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.66■■□□□ 1.7
NCLP19338 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NCLP19338 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NCLP19338 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NCLP19338 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NCLP19338 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.65■■□□□ 1.7
NCLP19338 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.65■■□□□ 1.7
NCLP19338 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.65■■□□□ 1.7
NCLP19338 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.65■■□□□ 1.7
NCLP19338 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.65■■□□□ 1.7
NCLP19338 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.65■■□□□ 1.7
NCLP19338 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NCLP19338 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.65■■□□□ 1.7
NCLP19338 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.65■■□□□ 1.7
NCLP19338 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
NCLP19338 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.64■■□□□ 1.7
NCLP19338 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.64■■□□□ 1.7
NCLP19338 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NCLP19338 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
NCLP19338 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.64■■□□□ 1.7
NCLP19338 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.64■■□□□ 1.7
NCLP19338 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NCLP19338 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.64■■□□□ 1.69
NCLP19338 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
NCLP19338 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
NCLP19338 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.63■■□□□ 1.69
NCLP19338 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.63■■□□□ 1.69
NCLP19338 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NCLP19338 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCLP19338 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCLP19338 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.62■■□□□ 1.69
NCLP19338 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
NCLP19338 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.62■■□□□ 1.69
NCLP19338 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.62■■□□□ 1.69
NCLP19338 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.62■■□□□ 1.69
NCLP19338 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NCLP19338 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.61■■□□□ 1.69
NCLP19338 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.61■■□□□ 1.69
NCLP19338 AC092028.1-203ENST00000608262 953 ntBASIC25.61■■□□□ 1.69
NCLP19338 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
NCLP19338 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
NCLP19338 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NCLP19338 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.61■■□□□ 1.69
NCLP19338 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
NCLP19338 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
NCLP19338 AL121603.2-201ENST00000557373 2117 ntBASIC25.6■■□□□ 1.69
NCLP19338 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
NCLP19338 AC144652.1-201ENST00000609974 1624 ntBASIC25.6■■□□□ 1.69
NCLP19338 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NCLP19338 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NCLP19338 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NCLP19338 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.6■■□□□ 1.69
NCLP19338 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
NCLP19338 SNX5-217ENST00000606557 1087 ntBASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms