Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.78■■□□□ 1.08
SNRPAP09012 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.78■■□□□ 1.08
SNRPAP09012 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.78■■□□□ 1.08
SNRPAP09012 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SNRPAP09012 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPAP09012 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPAP09012 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPAP09012 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPAP09012 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.77■■□□□ 1.08
SNRPAP09012 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.77■■□□□ 1.08
SNRPAP09012 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.77■■□□□ 1.08
SNRPAP09012 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.77■■□□□ 1.08
SNRPAP09012 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SNRPAP09012 AC092028.1-203ENST00000608262 953 ntBASIC21.77■■□□□ 1.08
SNRPAP09012 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPAP09012 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.77■■□□□ 1.08
SNRPAP09012 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.77■■□□□ 1.07
SNRPAP09012 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
SNRPAP09012 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SNRPAP09012 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPAP09012 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPAP09012 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SNRPAP09012 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
SNRPAP09012 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNRPAP09012 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.75■■□□□ 1.07
SNRPAP09012 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.75■■□□□ 1.07
SNRPAP09012 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.75■■□□□ 1.07
SNRPAP09012 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SNRPAP09012 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNRPAP09012 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPAP09012 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.74■■□□□ 1.07
SNRPAP09012 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SNRPAP09012 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNRPAP09012 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPAP09012 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.74■■□□□ 1.07
SNRPAP09012 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPAP09012 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.74■■□□□ 1.07
SNRPAP09012 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPAP09012 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNRPAP09012 C17orf82-201ENST00000623772 1530 ntBASIC21.74■■□□□ 1.07
SNRPAP09012 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPAP09012 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPAP09012 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPAP09012 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPAP09012 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNRPAP09012 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SNRPAP09012 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRPAP09012 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPAP09012 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPAP09012 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
SNRPAP09012 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.72■■□□□ 1.07
SNRPAP09012 AC005229.4-201ENST00000610085 2198 ntBASIC21.72■■□□□ 1.07
SNRPAP09012 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPAP09012 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPAP09012 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPAP09012 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNRPAP09012 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPAP09012 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SNRPAP09012 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPAP09012 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPAP09012 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPAP09012 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPAP09012 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.71■■□□□ 1.07
SNRPAP09012 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPAP09012 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.71■■□□□ 1.07
SNRPAP09012 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SNRPAP09012 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPAP09012 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
SNRPAP09012 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.7■■□□□ 1.06
SNRPAP09012 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SNRPAP09012 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.7■■□□□ 1.06
SNRPAP09012 MTDHP2-201ENST00000601468 714 ntBASIC21.7■■□□□ 1.06
SNRPAP09012 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.7■■□□□ 1.06
SNRPAP09012 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPAP09012 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms