Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOBP04114 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBP04114 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBP04114 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBP04114 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
APOBP04114 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC13.79□□□□□ -0.2
APOBP04114 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.79□□□□□ -0.2
APOBP04114 AC008550.1-201ENST00000511500 884 ntBASIC13.79□□□□□ -0.2
APOBP04114 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.79□□□□□ -0.2
APOBP04114 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.79□□□□□ -0.2
APOBP04114 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.79□□□□□ -0.2
APOBP04114 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
APOBP04114 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
APOBP04114 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.78□□□□□ -0.2
APOBP04114 AC004687.1-201ENST00000579003 1625 ntBASIC13.78□□□□□ -0.2
APOBP04114 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBP04114 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOBP04114 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
APOBP04114 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBP04114 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBP04114 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
APOBP04114 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBP04114 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.78□□□□□ -0.2
APOBP04114 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.78□□□□□ -0.2
APOBP04114 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
APOBP04114 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.78□□□□□ -0.2
APOBP04114 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.78□□□□□ -0.2
APOBP04114 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBP04114 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBP04114 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOBP04114 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.78□□□□□ -0.2
APOBP04114 AC073648.6-201ENST00000641589 218 ntBASIC13.78□□□□□ -0.2
APOBP04114 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.77□□□□□ -0.2
APOBP04114 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.77□□□□□ -0.2
APOBP04114 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
APOBP04114 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.77□□□□□ -0.2
APOBP04114 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.77□□□□□ -0.2
APOBP04114 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
APOBP04114 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
APOBP04114 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBP04114 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOBP04114 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
APOBP04114 AC068338.2-201ENST00000563278 1430 ntBASIC13.77□□□□□ -0.21
APOBP04114 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBP04114 FP325331.1-202ENST00000623531 1380 ntBASIC13.77□□□□□ -0.21
APOBP04114 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBP04114 MKRN4P-201ENST00000444706 1521 ntBASIC13.77□□□□□ -0.21
APOBP04114 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOBP04114 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC13.77□□□□□ -0.21
APOBP04114 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBP04114 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.77□□□□□ -0.21
APOBP04114 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOBP04114 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOBP04114 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOBP04114 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBP04114 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOBP04114 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.76□□□□□ -0.21
APOBP04114 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.76□□□□□ -0.21
APOBP04114 AC010141.3-201ENST00000456659 717 ntBASIC13.76□□□□□ -0.21
APOBP04114 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOBP04114 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 AC005224.4-201ENST00000583262 1652 ntBASIC13.76□□□□□ -0.21
APOBP04114 MIPEPP3-201ENST00000412105 444 ntBASIC13.76□□□□□ -0.21
APOBP04114 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBP04114 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.76□□□□□ -0.21
APOBP04114 AC133552.2-202ENST00000575694 574 ntBASIC13.76□□□□□ -0.21
APOBP04114 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.76□□□□□ -0.21
APOBP04114 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.76□□□□□ -0.21
APOBP04114 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC13.76□□□□□ -0.21
APOBP04114 AC211429.1-201ENST00000415277 523 ntBASIC13.76□□□□□ -0.21
APOBP04114 ECEL1P3-201ENST00000427961 737 ntBASIC13.76□□□□□ -0.21
APOBP04114 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOBP04114 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.76□□□□□ -0.21
APOBP04114 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOBP04114 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOBP04114 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC13.75□□□□□ -0.21
APOBP04114 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC13.75□□□□□ -0.21
APOBP04114 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOBP04114 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.75□□□□□ -0.21
APOBP04114 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
APOBP04114 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOBP04114 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOBP04114 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.75□□□□□ -0.21
APOBP04114 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.75□□□□□ -0.21
APOBP04114 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.75□□□□□ -0.21
APOBP04114 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.75□□□□□ -0.21
APOBP04114 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms