Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CHRNA1P02708 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHRNA1P02708 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHRNA1P02708 AC005224.4-201ENST00000583262 1652 ntBASIC23.87■■□□□ 1.41
CHRNA1P02708 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHRNA1P02708 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.87■■□□□ 1.41
CHRNA1P02708 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.87■■□□□ 1.41
CHRNA1P02708 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.87■■□□□ 1.41
CHRNA1P02708 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CHRNA1P02708 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHRNA1P02708 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHRNA1P02708 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHRNA1P02708 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.86■■□□□ 1.41
CHRNA1P02708 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHRNA1P02708 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.86■■□□□ 1.41
CHRNA1P02708 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CHRNA1P02708 CROCCP5-201ENST00000436658 830 ntBASIC23.86■■□□□ 1.41
CHRNA1P02708 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.86■■□□□ 1.41
CHRNA1P02708 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.86■■□□□ 1.41
CHRNA1P02708 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CHRNA1P02708 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHRNA1P02708 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHRNA1P02708 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CHRNA1P02708 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.85■■□□□ 1.41
CHRNA1P02708 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 AC092068.2-201ENST00000590491 1708 ntBASIC23.85■■□□□ 1.41
CHRNA1P02708 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.85■■□□□ 1.41
CHRNA1P02708 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.85■■□□□ 1.41
CHRNA1P02708 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.85■■□□□ 1.41
CHRNA1P02708 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.85■■□□□ 1.41
CHRNA1P02708 AC011767.1-201ENST00000617410 1153 ntBASIC23.85■■□□□ 1.41
CHRNA1P02708 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.85■■□□□ 1.41
CHRNA1P02708 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.85■■□□□ 1.41
CHRNA1P02708 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHRNA1P02708 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.84■■□□□ 1.41
CHRNA1P02708 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CHRNA1P02708 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CHRNA1P02708 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHRNA1P02708 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHRNA1P02708 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHRNA1P02708 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHRNA1P02708 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CHRNA1P02708 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.84■■□□□ 1.41
CHRNA1P02708 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.84■■□□□ 1.41
CHRNA1P02708 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.83■■□□□ 1.41
CHRNA1P02708 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.83■■□□□ 1.41
CHRNA1P02708 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.83■■□□□ 1.41
CHRNA1P02708 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHRNA1P02708 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CHRNA1P02708 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHRNA1P02708 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.83■■□□□ 1.41
CHRNA1P02708 AC009237.3-201ENST00000393279 1427 ntBASIC23.83■■□□□ 1.4
CHRNA1P02708 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHRNA1P02708 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.82■■□□□ 1.4
CHRNA1P02708 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHRNA1P02708 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CHRNA1P02708 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CHRNA1P02708 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.82■■□□□ 1.4
CHRNA1P02708 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.82■■□□□ 1.4
CHRNA1P02708 KRT18P11-201ENST00000435214 1283 ntBASIC23.82■■□□□ 1.4
CHRNA1P02708 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.82■■□□□ 1.4
CHRNA1P02708 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHRNA1P02708 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.82■■□□□ 1.4
CHRNA1P02708 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHRNA1P02708 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.81■■□□□ 1.4
CHRNA1P02708 AC104771.1-201ENST00000603335 964 ntBASIC23.81■■□□□ 1.4
CHRNA1P02708 AC104187.1-201ENST00000607510 612 ntBASIC23.81■■□□□ 1.4
CHRNA1P02708 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHRNA1P02708 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CHRNA1P02708 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.8■■□□□ 1.4
CHRNA1P02708 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CHRNA1P02708 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.8■■□□□ 1.4
CHRNA1P02708 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHRNA1P02708 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.8■■□□□ 1.4
CHRNA1P02708 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHRNA1P02708 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.8■■□□□ 1.4
CHRNA1P02708 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.8■■□□□ 1.4
CHRNA1P02708 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.8■■□□□ 1.4
CHRNA1P02708 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHRNA1P02708 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHRNA1P02708 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHRNA1P02708 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms