Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 AC105265.2-201ENST00000467189 838 ntBASIC16.82■□□□□ 0.28
TRBV12-3P01733 IGHV3-19-201ENST00000521488 291 ntBASIC16.82■□□□□ 0.28
TRBV12-3P01733 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV12-3P01733 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 AC068587.7-201ENST00000641602 218 ntBASIC16.82■□□□□ 0.28
TRBV12-3P01733 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV12-3P01733 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV12-3P01733 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV12-3P01733 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV12-3P01733 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV12-3P01733 GUSBP5-202ENST00000510805 1989 ntBASIC16.81■□□□□ 0.28
TRBV12-3P01733 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV12-3P01733 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV12-3P01733 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV12-3P01733 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
TRBV12-3P01733 AC010141.3-201ENST00000456659 717 ntBASIC16.81■□□□□ 0.28
TRBV12-3P01733 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV12-3P01733 AC087239.1-201ENST00000622671 572 ntBASIC16.81■□□□□ 0.28
TRBV12-3P01733 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV12-3P01733 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV12-3P01733 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV12-3P01733 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRBV12-3P01733 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 AC127496.7-201ENST00000625110 1798 ntBASIC16.79■□□□□ 0.28
TRBV12-3P01733 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV12-3P01733 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV12-3P01733 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV12-3P01733 AC139530.1-201ENST00000575312 1977 ntBASIC16.78■□□□□ 0.28
TRBV12-3P01733 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV12-3P01733 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms