Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX30O94993 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX30O94993 AC139530.1-201ENST00000575312 1977 ntBASIC20.21■□□□□ 0.83
SOX30O94993 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SOX30O94993 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SOX30O94993 AC010141.3-201ENST00000456659 717 ntBASIC20.2■□□□□ 0.82
SOX30O94993 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SOX30O94993 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SOX30O94993 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX30O94993 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SOX30O94993 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SOX30O94993 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX30O94993 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.19■□□□□ 0.82
SOX30O94993 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX30O94993 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.19■□□□□ 0.82
SOX30O94993 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX30O94993 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX30O94993 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX30O94993 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX30O94993 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX30O94993 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX30O94993 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX30O94993 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX30O94993 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX30O94993 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX30O94993 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SOX30O94993 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 AC080038.3-201ENST00000623346 1952 ntBASIC20.17■□□□□ 0.82
SOX30O94993 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SOX30O94993 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX30O94993 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.17■□□□□ 0.82
SOX30O94993 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.17■□□□□ 0.82
SOX30O94993 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SOX30O94993 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 EP400NL-214ENST00000641289 2402 ntBASIC20.17■□□□□ 0.82
SOX30O94993 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX30O94993 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX30O94993 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX30O94993 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX30O94993 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX30O94993 LINC00565-201ENST00000562710 2331 ntBASIC20.16■□□□□ 0.82
SOX30O94993 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX30O94993 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX30O94993 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.16■□□□□ 0.82
SOX30O94993 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX30O94993 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SOX30O94993 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SOX30O94993 MIR638-201ENST00000385237 100 ntBASIC20.16■□□□□ 0.82
SOX30O94993 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX30O94993 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX30O94993 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX30O94993 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX30O94993 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX30O94993 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.15■□□□□ 0.82
SOX30O94993 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX30O94993 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX30O94993 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX30O94993 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SOX30O94993 OXCT2P1-201ENST00000447263 1535 ntBASIC20.15■□□□□ 0.82
SOX30O94993 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SOX30O94993 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.15■□□□□ 0.82
SOX30O94993 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX30O94993 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX30O94993 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SOX30O94993 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.15■□□□□ 0.82
SOX30O94993 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SOX30O94993 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SOX30O94993 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX30O94993 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms