Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.03■■□□□ 1.6
ATP2A1O14983 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
ATP2A1O14983 KRT19P1-201ENST00000405746 1186 ntBASIC25.03■■□□□ 1.6
ATP2A1O14983 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.03■■□□□ 1.6
ATP2A1O14983 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.03■■□□□ 1.6
ATP2A1O14983 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.03■■□□□ 1.6
ATP2A1O14983 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP2A1O14983 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ATP2A1O14983 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
ATP2A1O14983 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP2A1O14983 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP2A1O14983 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP2A1O14983 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP2A1O14983 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.02■■□□□ 1.6
ATP2A1O14983 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.02■■□□□ 1.6
ATP2A1O14983 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.02■■□□□ 1.6
ATP2A1O14983 RAP2CP1-201ENST00000605103 478 ntBASIC25.02■■□□□ 1.6
ATP2A1O14983 AC080038.1-201ENST00000611274 1154 ntBASIC25.02■■□□□ 1.6
ATP2A1O14983 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ATP2A1O14983 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
ATP2A1O14983 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.01■■□□□ 1.59
ATP2A1O14983 ID1-201ENST00000376105 1233 ntBASIC25.01■■□□□ 1.59
ATP2A1O14983 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
ATP2A1O14983 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.01■■□□□ 1.59
ATP2A1O14983 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.01■■□□□ 1.59
ATP2A1O14983 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP2A1O14983 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP2A1O14983 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP2A1O14983 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP2A1O14983 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP2A1O14983 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
ATP2A1O14983 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP2A1O14983 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
ATP2A1O14983 AC016769.1-201ENST00000409132 1010 ntBASIC25■■□□□ 1.59
ATP2A1O14983 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25■■□□□ 1.59
ATP2A1O14983 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP2A1O14983 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25■■□□□ 1.59
ATP2A1O14983 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP2A1O14983 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.99■■□□□ 1.59
ATP2A1O14983 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP2A1O14983 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.99■■□□□ 1.59
ATP2A1O14983 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP2A1O14983 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.99■■□□□ 1.59
ATP2A1O14983 AC009237.3-201ENST00000393279 1427 ntBASIC24.99■■□□□ 1.59
ATP2A1O14983 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.99■■□□□ 1.59
ATP2A1O14983 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP2A1O14983 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.99■■□□□ 1.59
ATP2A1O14983 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP2A1O14983 AC079140.4-201ENST00000507448 529 ntBASIC24.99■■□□□ 1.59
ATP2A1O14983 AC005224.4-201ENST00000583262 1652 ntBASIC24.99■■□□□ 1.59
ATP2A1O14983 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
ATP2A1O14983 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.99■■□□□ 1.59
ATP2A1O14983 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP2A1O14983 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP2A1O14983 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.98■■□□□ 1.59
ATP2A1O14983 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP2A1O14983 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP2A1O14983 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP2A1O14983 CDCA4P2-201ENST00000441182 718 ntBASIC24.97■■□□□ 1.59
ATP2A1O14983 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ATP2A1O14983 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP2A1O14983 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP2A1O14983 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP2A1O14983 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
ATP2A1O14983 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.96■■□□□ 1.59
ATP2A1O14983 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.96■■□□□ 1.59
ATP2A1O14983 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.96■■□□□ 1.59
ATP2A1O14983 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.96■■□□□ 1.59
ATP2A1O14983 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.96■■□□□ 1.59
ATP2A1O14983 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
ATP2A1O14983 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP2A1O14983 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
ATP2A1O14983 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
ATP2A1O14983 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.95■■□□□ 1.59
ATP2A1O14983 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP2A1O14983 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.95■■□□□ 1.58
ATP2A1O14983 AC073111.5-205ENST00000641717 521 ntBASIC24.95■■□□□ 1.58
ATP2A1O14983 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP2A1O14983 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP2A1O14983 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.95■■□□□ 1.58
ATP2A1O14983 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
ATP2A1O14983 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ATP2A1O14983 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.94■■□□□ 1.58
ATP2A1O14983 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.94■■□□□ 1.58
ATP2A1O14983 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ATP2A1O14983 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
ATP2A1O14983 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP2A1O14983 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ATP2A1O14983 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP2A1O14983 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATP2A1O14983 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms